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integrated database of protein families, domains, and functional sites  (InterPro Inc)

 
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    Structured Review

    InterPro Inc integrated database of protein families, domains, and functional sites
    Integrated Database Of Protein Families, Domains, And Functional Sites, supplied by InterPro Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/protein-function+database/integrated+resource+of+protein+families++domains+and+sites++interpro++database/pmc12052182-190-10-17
    Average 90 stars, based on 1 article reviews
    integrated database of protein families, domains, and functional sites - by Bioz Stars, 2026-10
    90/100 stars

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    Related Articles

    other:

    Article Title: Nuclear phosphoproteome of developing chickpea seedlings (Cicer arietinum L.) and protein-kinase interaction network.
    Article Snippet: Article history: Received 22 October 2013 Accepted 2 April 2014 Nucleus, the control centre of eukaryotic cell, housesmost of the geneticmachineries required for gene expression and their regulation.. Post translational modifications of proteins, particularly phosphorylation control a wide variety of cellular processes but its functional connectivity, in plants, is still elusive.. This study profiled the nuclear phosphoproteome of a grain legume, chickpea, to gain better understanding of such event.

    Article Title: Characterization of the secretome of chickpea suspension culture reveals pathway abundance and the expected and unexpected secreted proteins.
    Article Snippet: The secretome of an organism is defined as a set of secreted proteins that encompasses all proteins exported to the extracellular space.. To better understand the chickpea secretome, we used callus culture to isolate and identify secreted proteins as a step toward determining their functions.. Proteins in the extracellular media of the suspension culture were examined using SDS-PAGE andmass spectrometry (LC MS/MS).

    Article Title: Extracellular Matrix Proteome and Phosphoproteome of Potato Reveals Functionally Distinct and Diverse Canonical and Non-Canonical Proteoforms
    Article Snippet: The protein functions were assigned using protein function database Pfam or InterPro or through literature survey.

    Article Title: Phosphoproteomic dynamics of chickpea (Cicer arietinum L.) reveals shared and distinct components of dehydration response.
    Article Snippet: Subscriber access provided by Georgetown University | Lauinger and Blommer Libraries Journal of Proteome Research is published by the American Chemical Society.. 1155 Sixteenth Street N.W., Washington, DC 20036 Published by American Chemical Society.. Copyright © American Chemical Society.

    Article Title: Differentially Expressed Proteins and Associated Histological and Disease Progression Changes in Cotyledon Tissue of a Resistant and Susceptible Genotype of Brassica napus Infected with Sclerotinia sclerotiorum
    Article Snippet: The protein functions were assigned based on the available literature and protein function database Pfam (pfam.sanger.ac.uk/) or InterPro ( www.ebi.ac.uk/interpro/ ).

    Functional Assay:

    Article Title: Comparative proteomics illustrates the molecular mechanism of potato (Solanum tuberosum L.) tuberization inhibited by exogenous gibberellins in vitro.
    Article Snippet: Among the multiple environmental signals and hormonal factors regulating potato tuberization, gibberellins (GAs) are important components of the signaling pathways in these processes.. To understand the GAs-signaling response mechanism of potato tuberization, a comparative proteomics approach was applied to analyze proteome change of potato tuberization in vitro subjected to a range of exogenous GA3 treatments (0, 0.01, 0.1 and 1.0 μΜ) using two-dimensional gel electrophoresis.. Quantitative image analyses showed that a total of 37 protein spots have their abundance significantly altered more than 2-fold.

    Sequencing:

    Article Title: Unveiling resistome profiles in the sediments of an Antarctic volcanic island.
    Article Snippet: The Deception Island, located in Maritime Antarctica, is a volcanic island with geothermal activity and one of the most visited by tourists.. However, the extent of the anthropogenic impact remains largely unknown and the factors shaping the resistance/tolerance mechanisms in the microbiomes from Whalers Bay ecosystems have never been investigated.. In this context, this study aimed to reveal the resistome profiles of Whalers Bay sediments and correlate them with environmental factors.

    Activity Assay:

    Article Title: Novel rare variations in genes that regulate developmental change in N-methyl- d -aspartate receptor in patients with schizophrenia
    Article Snippet: .. According to InterPro ( https://www.ebi.ac.uk/interpro/ ), a database for predicting protein function, P271 is located at the helical C-terminus in CDK5 and belongs to the protein kinase domain that is crucial for its serine/threonine protein kinase activity. ..



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